How to calculate the Z value of infernal cmscan?
1
0
Entering edit mode
21 months ago

The infernal Userguide says(link) enter image description here But the website of Rfam Help says(link) enter image description here Which is correct？If the infernal Userguide is correct, the number of CMs is 4108, am I right? enter image description here And I also want to know what would happen if I run cmscan without use this option. Thanks!
cmscan ncRNA infernal • 823 views
ADD COMMENT •
0
Entering edit mode
21 months ago
Dunois ★ 2.8k

Please see this discussion regarding the -Z switch:How to choose between --cut_ga, --cut_tc, and --cut_nc in hmmsearch? (hmmer).
ADD COMMENT •
0
Entering edit mode

I misunderstand.

ADD REPLY •

Login before adding your answer.

Similar Posts
Loading Similar Posts
Traffic: 1351 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6