how to interpret hi-c heatmap hdf5 file
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21 months ago
rheab1230 ▴ 140

Hello everyone, Does anyone know how to interpret heatmap of hi-c data. My data look like this: enter image description here

And how can I just filter to a certain genomic region and see the heatmap for it Like suppose I know a gene ENSG00000283633.1 is present in chr22. I want to see how many rsid are interacting with this gene using contact maps from HiC data. Is there anyway to do this?

heatmap maps hdf5 hi-c • 410 views
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