Module color label in WGCNA
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20 months ago
kivanvan • 0

I have a data set with about 500 features. Following the WGCNA tutorial, I got 19 modules. One of them is labeled as grey60, and I am a little confused whether this is unassigned or not. It is a small branch in the middle of below dendrogram (between two even thinner blue bars).

dendrogram

I read the documentation of labels2colors(). It seems that I shouldn't get any grey color if all features are assigned. I also checked the original module label, and there is no 0 module. Does it mean I can use this "grey60" as a regular module in downstream analysis?

labels2colors WGCNA • 1.0k views
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20 months ago

grey60 is a regular module

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Thank you!

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