Subsetting ATAC dataset
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20 months ago

Currently I am trying to subset a portion of my scATAC-seq data to look at the DARs for inhibitory neuronal clusters. I have done the following:

sub_obj <- subset(object = obj_name, idents = "Inhibitory"), assuming that the cluster is named "inhibitory". Since there are several clusters identifying as such, I thought it would be easiest to extract those clusters this way.

I keep generating the error "Cannot find the following identities in the object".

Please help? Any other techniques to use here?

DARs scATAC-seq scATAC • 383 views
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