Error in change Affymetrix transcript cluster id to Gene Symbol in microarray
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19 months ago
annotLookup <- select(hugene20sttranscriptcluster.db, keys = "TC1000011370.hg.1" , keytype = "ENTREZID",
                      columns = c( "ENSEMBL", "SYMBOL", "ENTREZID"))

Error in .testForValidKeys(x, keys, keytype, fks) : 
  None of the keys entered are valid keys for 'ENTREZID'. Please use the keys method to see a listing of valid arguments

what can i do for change Affymetrix transcript cluster id to Gene Symbol? Affymetrix transcript cluster id like "TC1000011370.hg.1"

microarray id cluster Affymetrix transcript • 566 views
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Looks like these ID's are from Clariom arrays, which are now part of Thermo Fisher.

GEO platform annotation may have the info you are looking for: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL23126

This file from Broad institute seems to have the annotations.

Probe Set ID    Gene Symbol Gene Title
TC1700007645.hg.1   MRM1    mitochondrial rRNA methyltransferase 1
TC0500009224.hg.1   LSM11   LSM11, U7 small nuclear RNA associated
TC0900008337.hg.1   ZNF462  zinc finger protein 462
TC0800010410.hg.1   PXDNL   peroxidasin-like
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