How to convert a GBFF GFF to GTF

Question

[CECEL]

I used this code:

bp_genbank2gff3 viral.1.genomic.gbff
gffread viral.1.genomic.gbff.gff -T -o viral.1.genomic.gtf

with the fna from ViralRefSeq. I can't convert the .gbff to .gtf for use in CellRanger mkref. How can I make this conversion?

Somebody can help me, please?

Answer 1

[GenoMax]

See: Convert .gbff (gene bank flat format) to gff3, gtf

You can't convert GBFF files to GTF.