rna long read length distibution
1
0
Entering edit mode
18 months ago
shinyjj ▴ 50

Hi, I want to compute a length distribution of a long read fastq file I have with x-axis being the length and y-axis being the count of that specific length. You can imagine a long tail distribution for either pacbio or ont. Is there a tool that can calculate the length distribution of a rna long read fastq file? I am not calculating the mean of the length!

long-read • 970 views
ADD COMMENT
1
0
Entering edit mode

Thanks! But these ones are quality vs length. Are there tools that count vs length?

ADD REPLY
1
Entering edit mode

NanoPlot and cramino will also give you a length distribution, the plot you are requesting.

ADD REPLY

Login before adding your answer.

Traffic: 1791 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6