ERROR: LoadError: UndefVarError: `composition` not defined ?
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Entering edit mode
17 months ago
Sapphire ▴ 10

Hi, i am trying to run Protparam and it gives the following error. Please let me know, how to use it on multiple files if anyone has used it before.

./protParamWrap -s example/sequence.fasta

|Seperating .fasta file into single files...                 |
|...                                                         |
|Creating protParam files...                                 |
|...                                                         |
|Calculating protein parameter based on sequence...          |
|     Processing file 1 of 26                                |
ERROR: LoadError: UndefVarError: `composition` not defined
Stacktrace:
 [1] protparam(protein::LongAA)
   @ ProtParam ~/miniconda3/envs/julia/share/julia/packages/ProtParam/Cq85q/src/ProtParam.jl:98
 [2] top-level scope
   @ ~/neelam/protParamWrap/34wt24-protParam.jl:7
in expression starting at /home/bvsbic/neelam/protParamWrap/34wt24-protParam.jl:7
|     Processing file 2 of 26                                |
ERROR: LoadError: UndefVarError: `composition` not defined
Stacktrace:
 [1] protparam(protein::LongAA)
   @ ProtParam ~/miniconda3/envs/julia/share/julia/packages/ProtParam/Cq85q/src/ProtParam.jl:98
 [2] top-level scope
   @ ~/neelam/protParamWrap/ACO25189-protParam.jl:7
in expression starting at /home/bvsbic/neelam/protParamWrap/ACO25189-protParam.jl:7
|     Processing file 3 of 26                                |

Thank you

Protpram • 382 views
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