NicheNetR software - is differential condition a must for identifying LR pairs?
0
0
Entering edit mode
16 months ago
Rituriya ▴ 50

Hi community,

I have been trying to get NicheNetR software working on my single cell RNA-seq data from a week now.

My question is I don't have any differential conditions (DE) to be looked at like control or treatment - I am simply interested in looking at how sender cells/ligands could possibly interact with receiver cells/receptors. I even tried reaching the author. Has anyone tried this recent tool and could give me some tips, I would be really obliged.

Thank you in advance, Rituriya

Nichenet • 335 views
ADD COMMENT

Login before adding your answer.

Traffic: 2074 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6