kraken in windows

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16 months ago

anasjamshed ▴ 140

Can we use kraken in windows? I am using Ugene sofware but unable to find exe file of kraken

kraken • 810 views

ADD COMMENT • link updated 16 months ago by Ram 44k • written 16 months ago by anasjamshed ▴ 140

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I am using Ugene sofware but unable to find exe file of kraken

What does UGENE have to do with Kraken? Why do you need the exe - have you tried compiling it from source?

ADD REPLY • link 16 months ago by Ram 44k

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I need to follow this workflow in ugene(windows): enter image description here

All steps were running fine but at kraken pint , they failed because kraken is not usable in windows

ADD REPLY • link 16 months ago by anasjamshed ▴ 140

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ADD REPLY • link 16 months ago by Ram 44k

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so what can i do?

ADD REPLY • link 16 months ago by anasjamshed ▴ 140

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Try and get access to a Linux machine. Talk to a bioinformatician in your institute.

ADD REPLY • link 16 months ago by Ram 44k

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