Chewbbaca - explanation of the output

Question

[davidmaimoun]

Hello!

I'm new in the field and I need to use Chewbbaca. In the end of the analysis, I get in a visualization folder, a file, cgMLST.tsv. Is the values in this file represent the allele distance of each specie from the schema alleles? Can somebody explain it to me?

Thank you

[Mark]

Have you read the documentation? https://chewbbaca.readthedocs.io/en/latest/index.html

[davidmaimoun]

Yes of course but since I don't have a bioinformatics background, I prefere to ask expert to be sur to not make mistakes