CNV using GISTIC
0
0
Entering edit mode
14 months ago

I did CNV analysis using GISTIC by taking data from cBioPortal. Now I am trying to do CNV analysis using GISTIC but taking the data from NCBI GEODATASET. What filter should I put under study type for CNV analysis?
CNV GISTIC • 640 views
ADD COMMENT •
0
Entering edit mode

Are you on the GenePattern website or are you using the standalone GISTIC tool?

ADD REPLY •
0
Entering edit mode

I am on GenePattern. I used the GISTIC2 module from there. but trying to get data from NCBI GEO. What can I choose as the study type?

ADD REPLY •
0
Entering edit mode

GenePattern has their own support site on Google groups. Please post there.

ADD REPLY •

Login before adding your answer.

Similar Posts
Loading Similar Posts
Traffic: 1773 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6