Extract Loci based on the snps number

Question

[safiq713]

I have ddard NGs data and data now in VCF format. I want to extract Loci, which has than 4 to 9 SNPS/loci for Skyline plotting. Can anyone can help me?

[Yogi]

I think this may be what you're looking for.

You can subset by regions.

https://samtools.github.io/bcftools/bcftools.html#view