Interpreting the CpG pearson correlation plot
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13 months ago
bioinfo_ga ▴ 70

I have performed DMR analysis using Methylkit and have generated the correlation plot but i am not able to interpret it completely. Apart from the correlation % what do the bar plots, color and x and y axis signify?

Differential-methylation • 755 views
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If you are talking about this : enter image description here

You have in the bottom left scatter plots of %methylation values for each pair of samples In diagonal, you have histograms of beta-value distribution for each sample

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yes i was talking about the same plot. Thank you

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You're best off showing an example figure

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