I want to use the CORASON command line to derive the phylogenetic tree for one of the selected secondary metabolite from bacterial genomes. I previously ran antiSMASH to get the BGCs from bacterial genomes and used BiG-SCAPE to get the gene cluster families (GCFs). I have a specific secondary metabolite and I want to understand the evolutionary relationship among the genomes so I ran CORASON command line "corason/CORASON/corason.pl -q "query_file" -g "/BiG-SCAPE_input_263_gbk/" -s "BGC_of_secondary_metabolite" but everytime I run this, I get this error message " Can't find Corason_Rast.IDs Rast ids file is needed,please provide one. But since I am running the command under -g (genebank file mode) then why do I still need to provide rast ids? Kindly help me on this.
Thank you..
