Entering edit mode
12 months ago
ThePlaintiff
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90
I'd be very grateful if someone could show me a tool that I could use to obtain genes that are close to a particular gene. The tool should answer the following questions for instance:
- Show me 100 genes that are in close proximity to gene X?
- Show me genes that are within 10MB of gene X.
NOTE: I know that I could manually obtain this information by reading directly from a genome viewer but I'm looking for programmatic solution e.g. a REST API.
Check out this post.
Or this one: Python: Finding Gene Closest To A Given Location