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10 months ago
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When I planned to analyze the data of single cell hic, I found that a preset file needed in the processing process was barcode file. I downloaded the data through SRA, but barcode data was not included in it. I would like to know how to find the barcode file and download it
the picture is what i found in schicexplorer.but i don't know how to download files like this in other datas. This file is stored in the GEO database, but I found that other schic datas in the GEO don't have such file.
The file you are showing is available for the entire series of samples (GSE94489) at the bottom of the page for the SRA record here (llok under supplementary files) : https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE94489
Post example accessions for such.
Because I want to be a database, but I found that the analysis of the schi - c need barcode file, I found a lot of have no barcode, such as https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE201917, How can I find the barcode file