How to obtain the gene set of KEGG module
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11 months ago
xingyu ▴ 10

KEGG manually collect the pathway information including biological process and disease development. Each pathway has genes involved in pathway activity. The pathway has several modules with different function. Therefore, How to obtain the gene set of KEGG module enter image description here

R gene-set KEGG • 1.3k views
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What does "curatelly" mean?

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Sorry, I made a mistake. I want to express that KEGG manually collect the pathway information including biological process and disease development.

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You can edit your post and make any changes you desire. Your comment does clarify your meaning, thank you.

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Thank you very much for your kind comment.

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11 months ago
5heikki 11k

Use their API

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Thank you very much for your suggestion. But I am a green hand for the use of API. Could you tell me the instruction of API use.

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Follow the link for the instructions. There are many examples there too..

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I will try the instructions. Thanks for your sincere comment again.

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11 months ago
Jeremy ▴ 930

KEGG module gene sets can be found here by clicking on the module of interest. You can then click on individual K numbers to find the gene names.

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Thank you very much for your comment. I also found another page about KEGG module gene sets, just like you. I want to further ask a question how to obtain this gene sets of different KEGG modules.

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