Question

FastQC report

1

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13 months ago

martab233 ▴ 10

Hello everyone,

I have a report like this. What does it mean? I am worrying because there is no information about minimum and maximum range of quality. Does it mean that the quality of it is really high?

Best, Marta

enter image description here

Fastqc • 634 views

ADD COMMENT • link 13 months ago by martab233 ▴ 10

score 3 · Answer 1 · 2023-12-19

3

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13 months ago

Sajad ▴ 90

The blue curve is the mean quality of base pairs in reads and this curve is totally in the green/good quality section of the plot. Thus, this shows data with high quality or good quality.

you can also read the documentation of FastQC.

https://www.bioinformatics.babraham.ac.uk/projects/fastqc/

ADD COMMENT • link 13 months ago by Sajad ▴ 90

0

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Thank you so much!

Best!

ADD REPLY • link 13 months ago by martab233 ▴ 10

score 2 · Answer 2 · 2023-12-19

2

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13 months ago

ATpoint 86k

Identical answer as in FastQC without yellow box

ADD COMMENT • link 13 months ago by ATpoint 86k