HiC-Pro allValidPairs to bam

0

Entering edit mode

11 months ago

Diego ▴ 110

Hi all,

I am running HiC-Pro and I need to cover the allValidPairs to bam to use it in Yahs. Does anyone have an idea on how to do this??

HiC-Pro • 519 views

ADD COMMENT • link updated 11 months ago by Ram 44k • written 11 months ago by Diego ▴ 110

0

Entering edit mode

cover the allValidPairs to bam

I'm assuming you mean "convert". HiC-Pro should also generate a BAM file if this page is to be believed. Is that not the case?

ADD REPLY • link 11 months ago by Ram 44k

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