Hey guys, I need help with R studio. I am using the detectRUNS package in R with the sliding window approach
I am using a dataset with merged panels for the SA merino sheep (only one breed) but the problem I am facing is that the The returned dataframe contains the following seven columns: "group", "id", "chrom", "nSNP", "from", "to", "lengthBps" (group: population, breed, case/control etc.; id: individual identifier; chrom: chromo- some on which the run is located; nSNP: number of SNPs in the run; from: starting position of the run, in bps; to: end position of the run, in bps; lengthBps: size of the run)
So the column “group” is for breed but seeing that I only have one breed my dataset first column is FID (Family ID) and I don’t know how to remove this
I have the same problem. do you know how to fix this problem?