Hey,
VEP changed the consequences some when last year a little (New; Old (using archive.org); Even older (using archive.org)). E.g. some new variants like feature_elongation
or sequence_variant
were introduced and regulatory_region_ablation
was changed from MODERATE
to MODIFIER
.
Is there any way to control, which version is used or this this hard coded in the VEP version (or in the Ensembl release version)?
And is the VEP version always the same then the Ensembl release. Meaning, if you started your analysis with Ensembl release 98, you should also use VEP version 98, or can you also define older (or newer) Ensembl releases in newer VEPs?
Tagging: Ben_Ensembl
This line serves to satisfy biostar spam check.
No one know an answer here?
I suggest that you directly email the Ensembl help desk. You can reference this post. Perhaps they will answer here or if you hear back from them then post their answer.