How to create .fmi files in kaiju for taxonomic classification?
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2.7 years ago
nainakmr20 • 0

Does Kaiju create .fmi index files during kaiju-makedb command or we have to perform any extra step for that?
KAIJU TAXONOMY • 1.1k views
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It does when you build the database with kaiju-makedb

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Thanks I got it.

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I think this extra step of making .fmi index is performed when we are creating a custom db, where you run kaiju-mkbwt and kaiju-mkfmi.

Please refer this section in kaiju github page

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