combined bam files

Question

[adi.gershon1]

hi im detecting intron retention and i have 2 individual with ran seq (I have created ba, files) I have 3 replicates for each individual. my mentor asked me if I could merge the 3 replicates to one bam files but I don't know how to do it can you help me?

Answer 1

[biofalconch]

Use samtools merge with sorted bam files