Retrieving gene expression from tabula muris in R

Question

[adri.vife]

Dear community,

I use to retrieve information related to gene expression from Tabula Muris directly in the browser. It only requires to select the tissue and type the gene name to get a table like the one in the image.

However, to do that for hundreds of genes I was wondering if I could use R. I tried some packages related to tabula Muris like the official one but I think there is no function to directly retrieve gene information like in the browser.

Does anyone know how to perform it automatically?

Thanks in advance,

[jv]

you can download data by tissue/organ in Seurat object format (and process in R) as described in the Data Availability section of the Tabula Muris manuscript