attempting to download eQTL data from eQTL catalog, but code not retrieving file
0
0
Entering edit mode
9 months ago
Orlando • 0

I am using the following code:

curl ftp://ftp.ebi.ac.uk/pub/databases/spot/eQTL/sumstats/QTS000015/QTD000271/QTD000271.all.tsv.gz -o ~/Downloads/QTD000271.all.tsv.gz

I use a Mac, however, I do not download any files, have tried using it multiple times, and each time it shows that no data is being downloaded at all.

I would be grateful for any help. xx

GWAS eQTL Genomics • 395 views
ADD COMMENT
0
Entering edit mode

Works on my machine. Can you run this and share the curl_err.err file please?

curl -s ftp://ftp.ebi.ac.uk/pub/databases/spot/eQTL/sumstats/QTS000015/QTD000271/QTD000271.all.tsv.gz -o ~/Downloads/QTD000271.all.tsv.gz &> curl_err.err
ADD REPLY
0
Entering edit mode

Hi there, i just downloaded directly from the site, took longer to find, but seemed an easier route as I'm only doing this a few times. Thank you so much though.xx

ADD REPLY

Login before adding your answer.

Traffic: 1694 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6