command not found: bigwigAverage

Question

[Aki]

Hi. I try the bigwigAverage function from deeptools, but I faced following error. My deeptools is version 3.5.1. On the other hand, bamCoverage is available in my command line. Does anyone face this and have a solution? I installed deeptools by conda install -c bioconda deeptools

command not found: bigwigAverage

[GenoMax]

Looks like conda installed v.3.5.1 does not have bigwigAverage in it,

Answer 1

[Aki]

Installing by pip has solved it. Thanks.