Entering edit mode
8 months ago
Wagner Daniel
•
0
I would like to know what the quality ranges are for Nanoplot and what criteria are used to determine these quality ranges or obtained quality results. my results were:
sample 1
General summary:
Mean read length: 569.0
Mean read quality: 14.0
Median read length: 221.0
Median read quality: 13.6
Number of reads: 18,713.0
Read length N50: 1,741.0
Total bases: 10,648,246.0
sample 2
General summary:
Mean read length: 2,283.7
Mean read quality: 14.0
Median read length: 1,390.0
Median read quality: 13.8
Number of reads: 161,819.0
Read length N50: 4,108.0
Total bases: 369,538,332.0
Is my quality data good or bad?
Don't compare nanopore data with Illumina quality scores. This data looks fine for nanopore.