Infering the cell composition from bulk RNA-seq data for mouse
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9 months ago
feather-W • 0

Hi,

I have a gene expression matrix of mouse and I want to predict the cell composition based on this matrix. However, many of the tools available are for humans, for example, xCell.

So I want to know if there are some tools to predict the cell composition based on bulk RNA seq data for mouse.

Thanks!

RNA-seq deconvolution mouse • 414 views
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9 months ago
ATpoint 86k

These tools are not species-specific. They take data and infer composition, from any organism.

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Ok, thanks for your help very much! Best wishes for you.

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