Entering edit mode
7 months ago
Daniel
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0
BIOF521 presents an SRR957824 for E. coli. However, when submitted to SRA, it comes up as "mouse". How can this be explained?
BIOF521 presents an SRR957824 for E. coli. However, when submitted to SRA, it comes up as "mouse". How can this be explained?
SRA has a feature to see how reads align to the tree of life. Most reads of this sample are bacteria.
Why do you think there is mouse there?
https://trace.ncbi.nlm.nih.gov/Traces/?view=run_browser&acc=SRR957824&display=analysis
However, when submitted to SRA, it comes up as "mouse".
What does that mean? I can see an entry that is E. coli for that accession : https://www.ncbi.nlm.nih.gov/sra/?term=SRR957824
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