cibersort. problem
0
1
Entering edit mode
8 months ago
gem1 ▴ 10

Hi, I am building gene expression matrix with cibersortx and I got this error

Error in rep(2, size * (length(cells) - 1)) : invalid 'times' argument
Calls: CIBERSORTxFractions -> makeRefandClassFiles
Execution halted

Does anyone encounter this before? What's the issue would be?. Thank you sooo much in advance.

cibersort gema122 • 699 views
ADD COMMENT
0
Entering edit mode

I'm also struggling with the same problem, or error. Did you encounter it when you create signature matrix from scRNA-seq? I'm using expression matrix aggregated by annotated cell types with Seurat. It doesn't work... I also need help for the issue...

ADD REPLY
0
Entering edit mode

Hi, fyfy. I hope you are well. I am having the same problem and also used Seurat. I want to ask you if you resolved it. Thank you so much for your answer.

ADD REPLY
0
Entering edit mode

Hi, Gem1. I hope you are well. I am having the same problem. I want to ask you if you resolved it. Thank you so much for your answer.

ADD REPLY

Login before adding your answer.

Traffic: 1756 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6