Entering edit mode
7 months ago
roussine
▴
10
Hello all -
as I can see, the Convert
function of SeuratDisk (from h5Seurat
to h5ad
) will never touch the counts
dataset (not-normalised matrix) of the default assay (e.g., "RNA") in a h5Seurat
object, as it gives priority to "scale.data
" (variable features only) and then "data
" (normalised matrix) when filling X
.
Is there a way to force such conversion?..
Thanks a lot in advance for any help
Leo