Annovar using R package
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7 months ago
DKA ▴ 40

Hello, Is there any R package that can facilitate the annotation of VCFs using ANNOVAR, please? If not, is there any other R package that can help annotate VCFs against gnomADv4, please? Thank you.

Annovar gnomAD R • 494 views
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duplicate of your previous question: VCF annotation with gnomADv4 using R package

why using R when there are shell-based tools like VEP ? slivar , etc...

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Thank you for your guidance. The thing is that I am unfamiliar with using such environments, unfortunately.

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