Entering edit mode
7 months ago
sooni
▴
20
The following error occurred in PseudobulkExpression.Seurat(object = object, assays = assays,:
None of the requested assays are present in the object.
The above error occurs. Below is the code I ran:
cts <- AggregateExpression(seurat_from_cds,
group.by = c("Cell.Type", "Samples"),
assays = "originalexp",
slot = "Counts",
return.seurat = F)
How can I solve this error?
Thank you for help!
Does the assay
originalexp
exist in your objectseurat_from_cds
?