monocle3 dot plot by groups and each cell types

Question

[sooni]

Hello.

I want to draw a dot plot showing the difference between two groups (control vs. treat1) by cell types for two specific genes. Should I draw it using the plot_genes_by_groups() function? If so, how should I code it? Or should I use another method?

Thank you for help!

[zx8754]

monocle3 has a nice website, what have you tried?

• https://cole-trapnell-lab.github.io/monocle3/docs/clustering/