Subset of Transcripts- How do I proceed with it?

Question

[Varsha]

Hi!

I have run Stringtie with -e -B -G options and generated gene.abundance.tab and gtf files. How do I subset the transcripts? also I have a list of noncoding RNAs.

[Carlo Yague]

Hello Varsha, can you please clarify your question ? On what criteria do you want to subset the transcripts ?