Entering edit mode
6 months ago
yuxiang
•
0
Hi! As I want to use the eQuilibrator api to calculate my metabolic pathway, there are more than 10 reactions, I want to know how can I upload a tsv edition file on KEGG about these reactions. In eQuilibrator, it showed a example of cell fermentation. Below is the tsv file:
!!!SBtab DocumentName='Pathway Model' SBtabVersion='1.0'
!!SBtab TableName='Reaction' TableID='Reaction' TableType='Reaction'
!ReactionFormula !RelativeFlux
D-Glucose + ATP <=> D-Glucose 6-phosphate + ADP 1
D-Glucose 6-phosphate <=> D-Fructose 6-phosphate 1
ATP + D-Fructose 6-phosphate <=> ADP + Fructose-1,6-bisphosphate 1
Fructose-1,6-bisphosphate <=> Glycerone phosphate + D-Glyceraldehyde 3-phosphate 1
Glycerone phosphate <=> D-Glyceraldehyde 3-phosphate 1
Pi + NAD+ + D-Glyceraldehyde 3-phosphate <=> NADH + 1,3-Bisphosphoglycerate 2
ADP + 1,3-Bisphosphoglycerate <=> ATP + D-Glycerate-3-phosphate 2
D-Glycerate-3-phosphate <=> D-Glycerate-2-phosphate 2
D-Glycerate-2-phosphate <=> Phosphoenolpyruvate + H2O 2
ADP + Phosphoenolpyruvate <=> Pyruvate + ATP 2
Pyruvate <=> Acetaldehyde + CO2 2
Acetaldehyde + NADH <=> Ethanol + NAD+ 2