Entering edit mode
6 months ago
Sander
•
0
Hi all,
I'm trying to make a nice histogram of my data. But all the time I didn't get values on the x and y axes of the histogram with the hist function. I've found out that this only occurs after running DimHeatmap. is there in DimHeatmap somewhere a settings that overrides some settings of the hist function? I'm using R version 4.4.0 with Seurat 5.1.0 on Ubuntu 22.04.4 LTS.
It's completely unclear what you are asking. Please, in light of how you ask a good questions in fora like this, add example data, minimal code to reproduce the issue, and an example of desired outout.
Basically I follow this tutorial with my own data until the line with
DimPlot(pbmc, reduction = "pca") + NoLegend()
. Only my line isDimPlot(pbmc, reduction = "pca")
. Then I run the following 3 lines:And I get this picture:
Then I'm running
DimHeatmap(pbmc, dims = 1, cells = 500, balanced = TRUE)
and then I run again:And then I get the picture depicted below without numbers on the X and Y axis.
And now my question is, how can I get the first picture with the numbers on the X and Y axis after running the line with the
DimHeatmap
Please do not add answers unless you're answering the top level question. Instead, use
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as appropriate. I've moved your post to the right location this time, please be more careful in the future.