How to download a file from zenodo link without leaving terminal?
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4 months ago
SlowSD • 0

Hii,

I have a zenodo link. This link is fully functional and upon pasting in the url space, file is correctly downloaded in the usual c://user/download directory.

However, I wish to download the file in the current working directory and don't wish to leave unix terminal. I thought an easy would be to append wget or curl command in front of the link as shown below.

wget https://zenodo.org/records/11791175/files/SRR396636.sra_1.fastq

or

curl https://zenodo.org/records/11791175/files/SRR396636.sra_1.fastq

Unfortunately, this causes download of the html file with the name of SRR396636.sra_1.fastq. While the original file is of 600mb, the file downloaded using the wget or curl command is in 2-5kb size range.

Kindly suggest possible method.

Thank you in advance.

axel linux curl wget • 1.2k views
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Could you try wget -L -O SRR396636.sra_1.fastq "https://zenodo.org/record/11791175/files/SRR396636.sra_1.fastq"

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Still, a 6kb html file gets downloaded in the name of SRR396636.sra_1.fastq

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https://zenodo.org/records/11791175

The record is publicly accessible, but files are restricted to users with access.

so, no.

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Okay, are you aware of any file access setting in zenodo by changing which this can work out?

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You have tried to log in with one of the methods mentioned (ORCID/GitHub or a local Zenodo account) and that did not work?

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Sorry, I'm not able to understand your answer. Could you try again?

I am repeating my query again, I have uploaded the file to my zenodo account, and I wish to make it available to download without leaving the terminal. The link works fine if pasted in url space.

Thanks.

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What does the tag axel mean?

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From my little understanding, axel works like wget and curl to download the files. However, it accelerates the downloading by some means. I used in this question to describe that axel is also not helpful for me.

Hope I answered your question.

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Yes, thank you.

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4 months ago
GenoMax 147k

Hmm. So you are the owner of the uploaded data? Guess you need to change something to make the set public/unrestricted

cls

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Hii,

I am thankful to you for bringing this nicely. It was a mistake from my end as I am new to zenodo. I have fixed the access settings. The link is working fine, and files now can be downloaded using the wget/curl commands.

Thank you for helping.

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