Question

Reactome GSA results

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6 months ago

Shaimaa Gamal ▴ 10

Is there a way to download the found entities and their corresponding pathway in a csv format?

Reactome GSA results

Pathway-analysis ReactomeGSA • 633 views

ADD COMMENT • link 5 months ago by Shaimaa Gamal ▴ 10

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6 months ago

Mensur Dlakic ★ 28k

You have a button on the left that says "Downloads" which will give you an option to save the results.

ADD COMMENT • link 6 months ago by Mensur Dlakic ★ 28k

score 2 · Accepted Answer · 2024-06-20

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6 months ago

NancyTLi ▴ 20

For ReactomeGSA, you must select "create reports" while in the analysis workflow, step 4. After the reports are generated, you will have a link to the .csv, .pdf, and an .r files. The .csv report should have all of the information you are looking for.

Please contact help@reactome.org for more prompt answers to your issues! Thanks!

ADD COMMENT • link 6 months ago by NancyTLi ▴ 20

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I tried all these options but none of them gave me the results in this format. I want to know which input genes appeared in every enriched pathway

ADD REPLY • link 5 months ago by Shaimaa Gamal ▴ 10