Clustering single-cell CNV data
0
0
Entering edit mode
5 months ago

I have ran infercnv on a large single-cell dataset of over 300,000 cells. I've collapsed the resulting ratios into a single object but it's prohibitively large for using something like hierarchical clustering. Can anyone recommend a decent approach to clustering the data, or even a better approach to dealing with the output of something like infercnv?

R clustering infercnv CNV scRNA • 222 views
ADD COMMENT

Login before adding your answer.

Traffic: 2822 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6