MCScanx is giving an Empty Output

Question

[agnes.barros88]

Hi, I'm trying to run the MCScanX command but I keep getting following error from MCScanx:

############### Parameters ###############
# MATCH_SCORE: 50
# MATCH_SIZE: 5
# GAP_PENALTY: -1
# OVERLAP_WINDOW: 5
# E_VALUE: 1e-05
# MAX GAPS: 25
############### Statistics ###############
# Number of collinear genes: 0, Percentage: -nan
# Number of all genes: 0
##########################################

My input files are ok (blast and gff files) and I've already try put the files inside MCScanX folder without creating a separate folder, but the command doesnt work anyway... Does anyone can help me? Thanks

[Pierre Lindenbaum]

https://github.com/wyp1125/MCScanX

MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!