Problem evaluating chewBBACA schema
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Entering edit mode
5 months ago
blur ▴ 280

Hi,

I have started using chewBBACA and tried creating my own schema. The cmd used are:

 chewBBACA.py CreateSchema -i /path/to/InputAssembliesFolder -o /path/to/OutputFolder --n SchemaName

Then I wanted to evaluate it:

chewBBACA.py SchemaEvaluator -g /path/to/SchemaFolder -o /path/to/OutputFolder --cpu 4 --loci-reports

But the report I get is limited, not containing the tree or other data as per the documentation:

https://chewbbaca.readthedocs.io/en/latest/user/modules/SchemaEvaluator.html

Where have I gone wrong?

schema chewBBACA • 166 views
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