Entering edit mode
5 months ago
fati90sellam90
•
0
Hi,
I have performed gene ontology (GO) analysis on a set of genes using Blast2GO. I want to visualize the results in a barplot, with the count of genes on one axis and their respective GO terms on the other, similar to the figure generated using WEGO (I found it in an article):
I have a tab-delimited file containing genes and their corresponding GO terms in each line, but it didn't work with WEGO. Is there any other method or tool to visualize my data in a barplot like this? Or do you have any ideas on how to debug the issue with WEGO?
Here is what my data looks like:
demo1000051 GO:0006914 GO:0007010 GO:0030163 GO:0048870 GO:0008092 GO:0060090 GO:0005634 GO:0005856
demo1000213 GO:0012501 GO:0022414 GO:0030154 GO:0048856 GO:0098772 GO:0005615 GO:0031410
demo1000411 GO:0051301 GO:0007099 GO:0000278 GO:0006289 GO:0005814 GO:0005813 GO:0005737 GO:0000922 GO:0005509 GO:0016020
demo1000691 GO:0008150 GO:0003677 GO:0005575 GO:0005634 GO:0008643 GO:0090481 GO:0015165 GO:0000139
demo1001091 GO:0006091 GO:0006520 GO:0006629 GO:0030154 GO:0048856 GO:0016491 GO:0016853 GO:0005768 GO:0005829 GO:0005886 GO:0042438 GO:0016491 GO:0033162
demo1001111
demo1001201
demo1001431 GO:0016192 GO:0005654 GO:0005783 GO:0005794 GO:0031410 GO:0006888 GO:0006890 GO:0000139 GO:0005789 GO:0030134 GO:0033116
demo1001601 GO:0002376 GO:0006954 GO:0007155 GO:0023052 GO:0034330 GO:0048856 GO:0005886 GO:0043226 GO:0016020
Thanks for your help!
This blog could be helpful for you.
Replicating WEGO Plots using ggplot2