RNA seq data for normal samples

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3 months ago

maryak ▴ 20

Where do I download RNA-seq expression data for normal samples? My study is related to breast cancer metastasis identification.

RNA-seq • 470 views

ADD COMMENT • link updated 12 weeks ago by Raag ▴ 20 • written 3 months ago by maryak ▴ 20

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go to the TCGA...

ADD REPLY • link 3 months ago by pinheirofabiano ▴ 90

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Your data analysis would be confounded. Control samples from GEO and cancer samples from your lab.

ADD REPLY • link 3 months ago by jkim ▴ 180

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better get everything from the TCGA, otherwise will have batch effect..

ADD REPLY • link 12 weeks ago by pinheirofabiano ▴ 90

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TCGA still has batch effects…

ADD REPLY • link 12 weeks ago by Raag ▴ 20

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