Whole Metagenome Analysis

Question

[karthick]

Hi Guys,

I have a FASTQ file containing whole metagenome sequencing Raw Data. Could anyone please suggest a workflow or article for metagenome analysis? I have no prior knowledge of metagenome analysis.

Answer 1

[Pierre Lindenbaum]

nf-core/mag is a bioinformatics best-practise analysis pipeline for assembly, binning and annotation of metagenomes.

https://nf-co.re/mag/2.5.4/docs/usage/

[karthick]

Thank you, sir. Please suggest any article.