Conflict packages R

Question

[marco.barr]

Hi everyone, after updating R to version 4.4.1 and all my packages, I get these warning messages with any command, like setwd():

Warning messages: 
1: found multiple methods tables for ‘sort’ 
2: found multiple methods tables for ‘sort’

I tried to identify which packages might be causing this and found these:

methods(sort)
[1] sort,ANY-method sort.bibentry*  sort.DataFrame* sort.default    sort.integer64* sort.List*      sort.POSIXlt   
[8] sort.Rle*       sort.Vector*

but I don’t understand how to fix it. Can you help me? Thank you very much for your support.

[Michael]

You might have installed a package that caused this or your R installation is somehow messed up. Try starting R with --vanilla to not load any packages and see if it goes away. Also, it is just a warning and at best an R issue, not really bioinformatics. If you want help with this elsewhere, you need to post the output of sessionInfo().