multiple sequence alignmet

Question

[harry]

Dear all, please help me find the best tool for the nucleotide sequence alignment of the multiple sequences of the colourful and interactive publication quality figures of the multiple sequences. Thanks in advance

[Pierre Lindenbaum]

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Answer 1

[Mensur Dlakic]

I don't think there is a tool that will do the alignment AND create publication quality images. Those two functionalities usually come from different programs.

• https://mafft.cbrc.jp/alignment/software/
• http://www.clustal.org/omega/
• https://www.jalview.org/
• https://github.com/moshi4/pyMSAviz