Circos tool
0
0
Entering edit mode
5 weeks ago

The image from circos plot I got. I want to add the background color to the layers in which histogram are present. Also I want to remove the grey line on both sides of the histogram

<plot>
type  = histogram
file  = hist1_1.txt
r1    = 0.59r
r0    = 0.54r
min   = 0
max   = 12
stroke_type = none
<axes>
<axis>
spacing = 8
zero = yes
zero_color = black 
zero_thickness = 2 
</axis>
</axes>
</plot>

This the code I am using for drawing the histogram inside the ideaogram. This is circos plot drawn using circos tool:

This is circos plot drawn using circos tool

karyotype circos • 213 views
ADD COMMENT
0
Entering edit mode

You can do it with photoshop.

Which package are you using to draw you circos plot ?

The code you are sharing is an HTML template, where is it coming from ?

ADD REPLY
0
Entering edit mode

Ya we can do it photoshop. But there are seperate tools which have enough optins.

Circos (https://circos.ca/ ) is name of the tool.

The code is not html template. This tool have seperate scripting which looks similar to HTML but not at all HTML code. Thankyou for your reply. I got the options to modify the background.

ADD REPLY

Login before adding your answer.

Traffic: 2599 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6