1000 genome dataset download

Question

[Soohyun]

I would like to compare the results of fastNGSadmix, iAdmix and ADMIXTURE. I want to download the data of 1000 genomes. How do I download the entire vcf of a specific sample, not the vcf broken down by chromosome? Or are there any papers or posts comparing the three tools?

Answer 1

[chrchang523]

https://www.cog-genomics.org/plink/2.0/resources#phase3_1kg has plink2-format files, from which you can export a VCF.